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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23160547_23169726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23160547 - 23169726

Intron Length:

9180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

AATCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTCATAACC

Flanking Amino Acid:

IIPEKNSLRQTYNSCARLCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.68

0.8

35.7

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

63.5

0.4

1.6

71.79

39.2

Associated Gene:

Gene:

BTRC

Ensembl Gene ID:

ENSAPLG00000008388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021619

23105980 - 23190047

84068

ENSAPLT00000008717

23108009 - 23201303

93295

ENSAPLT00000047731

23108109 - 23201303

93195

ENSAPLT00000024667

23108009 - 23171903

63895