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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23190054_23201246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23190054 - 23201246

Intron Length:

11193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGACTG

5'SS Class:

major

3'SS Sequence:

CCTTTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CATCTCATAGTT

Flanking Amino Acid:

SSGYQAWLKQCSMPRSLWLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

58.5

46.1

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

85.7

0.8

0.7

80.5

24.8

Minor 5ss

30.5

-2.2

3.3

39.1

46.1

Minor BPS

46.6

-0.1

1.8

63.2

41.1

Associated Gene:

Gene:

BTRC

Ensembl Gene ID:

ENSAPLG00000008388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047731

23108109 - 23201303

93195

ENSAPLT00000008717

23108009 - 23201303

93295