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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23338679_23339771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23338679 - 23339771

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

PENNLMNVIKFLDFCTTVVK

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.1

0.63

78.9

32.8

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

SLF2

Ensembl Gene ID:

ENSAPLG00000004041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004149

23329936 - 23357231

27296