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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23480244_23480524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23480244 - 23480524

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CGGTCCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGTCCCTCACCT

Flanking Amino Acid:

NTKSVKILMDRTQNCTGGSL

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

61.8

0.27

35.2

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

58.3

0.34

1.9

78.98

42.6

Associated Gene:

Gene:

TRIM8

Ensembl Gene ID:

ENSAPLG00000002530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002547

23479263 - 23482138

2876