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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23494538_23495654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

23494538 - 23495654

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

CTTCGCTCGACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.1

80.1

32.8

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

70.6

0.46

70.5

34.1

Minor 5ss

32.7

-2

3.4

47.9

47.7

Minor BPS

49.6

0.05

2.1

73.07

43.9

Associated Gene:

Gene:

ARL3

Ensembl Gene ID:

ENSAPLG00000016017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040405

23494459 - 23515152

20694