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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23495726_23502708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23495726 - 23502708

Intron Length:

6983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CTGAGGATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CTTTTCCCATTT

Flanking Amino Acid:

CSALSGEGVQTICFTPISAA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

64.4

0.32

1.1

58.5

46.1

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

45.7

-0.2

2.1

68.16

43.2

Associated Gene:

Gene:

ARL3

Ensembl Gene ID:

ENSAPLG00000016017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040405

23494459 - 23515152

20694