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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23521336_23521512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23521336 - 23521512

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CGGTGCTGACGC

Flanking Amino Acid:

TAVGLNLYTKRAPPLLARWV

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

74.1

0.54

0.7

68.4

25.2

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

38.2

-0.9

2.2

43.13

44.3

Associated Gene:

Gene:

SFXN2

Ensembl Gene ID:

ENSAPLG00000030360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024966

23520153 - 23523531

3379