Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_23576547_23577548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23576547 - 23577548

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTACGTACC

5'SS Class:

major

3'SS Sequence:

CTCCCGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TGCTCGCGAAAT

Flanking Amino Acid:

HNYSALPFYLRFLPNYLLPP

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.3

69.9

40.9

Major BPS

61.3

0.28

30.6

Major PPT

76.4

0.59

0.8

72.4

32.3

Minor 5ss

37.3

-1.4

2.9

45.8

35.3

Minor BPS

42.2

-0.5

2.4

63.91

45.5

Associated Gene:

Gene:

WBP1L

Ensembl Gene ID:

ENSAPLG00000012879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026879

23525630 - 23578361

52732

ENSAPLT00000026354

23556456 - 23578361

21906

ENSAPLT00000013408

23547130 - 23578361

31232

ENSAPLT00000036201

23525630 - 23578361

52732

ENSAPLT00000028182

23556456 - 23578361

21906