Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_23583621_23583812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23583621 - 23583812

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTGCTGACGC

Flanking Amino Acid:

TVLYLLHYPEVQRKIQEEMD

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

71.3

0.48

0.8

61.4

34.9

Minor 5ss

32.6

-2

3.2

41.8

45.1

Minor BPS

38.7

-0.8

2.2

44.37

43.4

Associated Gene:

Gene:

CYP17A1

Ensembl Gene ID:

ENSAPLG00000012297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012822

23582711 - 23585776

3066