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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23797957_23798486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23797957 - 23798486

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

ATTITECLHTFCKSCIVRHF

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

92.4

0.95

0.6

87.4

23.1

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

PCGF6

Ensembl Gene ID:

ENSAPLG00000026176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048348

23779994 - 23799963

19970