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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23800398_23801575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23800398 - 23801575

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

AACGCTTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CTGTTGTTAAAC

Flanking Amino Acid:

AAAATVPPGKVGGGVVEDQP

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

72.8

0.51

0.9

65.5

40.1

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

49.5

-0

2.2

62.53

43.2

Associated Gene:

Gene:

TAF5

Ensembl Gene ID:

ENSAPLG00000011406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034303

23799857 - 23809855

9999

ENSAPLT00000011907

23799857 - 23810393

10537