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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23801814_23802915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23801814 - 23802915

Intron Length:

1102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

CATCTCCTATCA

Flanking Amino Acid:

HESEAKSFFERFHGDQECYY

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

30.2

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

91.9

0.94

0.5

89.3

19.5

Minor 5ss

47.4

-0.3

2.7

66.9

44.4

Minor BPS

46.7

-0.2

1.9

58.39

40.9

Associated Gene:

Gene:

TAF5

Ensembl Gene ID:

ENSAPLG00000011406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034303

23799857 - 23809855

9999

ENSAPLT00000011907

23799857 - 23810393

10537