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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23804057_23804522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23804057 - 23804522

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAAGG

5'SS Class:

major

3'SS Sequence:

TGTGTGCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TAGTTCGTAAAA

Flanking Amino Acid:

KQDPNAPPQNRIPLPELKDS

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

57.5

47.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

72.7

0.51

0.9

66.2

40.8

Minor 5ss

37.3

-1.4

3.1

49.6

46.3

Minor BPS

50.6

0.01

2.1

65.23

41.1

Associated Gene:

Gene:

TAF5

Ensembl Gene ID:

ENSAPLG00000011406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034303

23799857 - 23809855

9999

ENSAPLT00000011907

23799857 - 23810393

10537