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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23804659_23805171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23804659 - 23805171

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTAAA

5'SS Class:

major

3'SS Sequence:

ATTTTGTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AACAACATAAAA

Flanking Amino Acid:

CFYTFLNAYQGLTAVDITDD

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

75.3

36.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

74.1

0.54

69.3

41.3

Minor 5ss

-2.3

2.7

33.5

41.8

Minor BPS

44.3

-0.4

1.8

51.72

38.7

Associated Gene:

Gene:

TAF5

Ensembl Gene ID:

ENSAPLG00000011406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034303

23799857 - 23809855

9999

ENSAPLT00000011907

23799857 - 23810393

10537