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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23823593_23824927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23823593 - 23824927

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTTTCTAAAAG

Flanking Amino Acid:

KEIRNLLKRRESGIARSLCE

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

72.8

0.51

1.1

75.7

31.8

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

62.6

0.26

1.8

72.05

40.8

Associated Gene:

Gene:

PDCD11

Ensembl Gene ID:

ENSAPLG00000010301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010824

23812910 - 23837296

24387