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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23828325_23828832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23828325 - 23828832

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

TTCTTTTTGTCT

Flanking Amino Acid:

GQTVTCFVKKYNVLKNWLEV

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

79.6

0.67

0.9

37.2

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

-0.2

3.4

77.67

39.7

Associated Gene:

Gene:

PDCD11

Ensembl Gene ID:

ENSAPLG00000010301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010824

23812910 - 23837296

24387