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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23832826_23833146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23832826 - 23833146

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCAAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

EEEAAENKSKLRKRGEAPRL

Intron Amino Acid Position:

1489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.4

0.53

0.9

70.7

33.7

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

PDCD11

Ensembl Gene ID:

ENSAPLG00000010301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010824

23812910 - 23837296

24387