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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23848338_23849262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23848338 - 23849262

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCACCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCACCCCTCACC

Flanking Amino Acid:

AVRYLRCISQALGWCFMLLM

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

73.1

0.52

0.8

65.7

30.1

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

48.3

-0.1

2.1

61.55

43.3

Associated Gene:

Gene:

CALHM1

Ensembl Gene ID:

ENSAPLG00000010081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010490

23847858 - 23849811

1954