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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23858350_23859114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23858350 - 23859114

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTAATCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTTCTAATC

Flanking Amino Acid:

VSRYLRCWSQALGWSILLML

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.3

0.41

62.3

38.4

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

60.3

0.3

1.6

71.19

Associated Gene:

Gene:

CALHM3

Ensembl Gene ID:

ENSAPLG00000015563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016221

23857903 - 23860427

2525