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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23965686_23969353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23965686 - 23969353

Intron Length:

3668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

AATGCTGTTATT

Flanking Amino Acid:

IIIYEQVRLKITKKQCCWSG

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

0.47

1.2

61.1

45.5

Major PPT

0.94

0.7

88.3

28.9

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

43.8

-0.4

2.2

62.51

42.5

Associated Gene:

Gene:

NEURL1

Ensembl Gene ID:

ENSAPLG00000006704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006958

23941763 - 24023976

82214

ENSAPLT00000004122

23877065 - 24023976

146912