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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24003364_24040592_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24003364 - 24040592

Intron Length:

37229

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCCAAAGCC

5'SS Class:

major

3'SS Sequence:

AGCTCAAAGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

CCATTCCTACTC

Flanking Amino Acid:

QRNGIPVSTVRLLSPLSVLS

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

70.1

35.1

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

50.8

0.02

1.1

44.9

40.1

Minor 5ss

16.1

-3.9

3.6

25.3

36.6

Minor BPS

44.8

-0.4

1.9

50.62

40.9

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033859

24003183 - 24268967

265785