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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24042513_24044952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24042513 - 24044952

Intron Length:

2440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

CTATTTGCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATTGAACG

Flanking Amino Acid:

RPPPRRESSLGFQLPKPPEP

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.2

77.4

36.9

Major BPS

90.7

1.01

0.7

19.9

Major PPT

69.8

0.45

0.9

36.2

Minor 5ss

44.3

-0.6

2.5

58.3

40.2

Minor BPS

55.4

0.03

1.8

66.31

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023035

24040367 - 24268967

228601

ENSAPLT00000045467

24040367 - 24106423

66057

ENSAPLT00000021321

24039734 - 24268967

229234

ENSAPLT00000045338

24039734 - 24210668

170935

ENSAPLT00000006940

24040367 - 24102759

62393

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000026005

24040367 - 24210668

170302