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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24045003_24045865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24045003 - 24045865

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

CTTTCCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

GTTAAGTAAACT

Flanking Amino Acid:

ARIAPQRAQISSPNLRTRPP

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

63.3

42.8

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

85.8

0.81

0.7

84.2

23.6

Minor 5ss

31.8

-2.1

3.3

38.8

40.7

Minor BPS

45.4

-0.2

2.4

70.56

45.7

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023035

24040367 - 24268967

228601

ENSAPLT00000045467

24040367 - 24106423

66057

ENSAPLT00000021321

24039734 - 24268967

229234

ENSAPLT00000045338

24039734 - 24210668

170935

ENSAPLT00000006940

24040367 - 24102759

62393

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000026005

24040367 - 24210668

170302