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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24046201_24051736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24046201 - 24051736

Intron Length:

5536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TTTGCATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTTTGATATTT

Flanking Amino Acid:

QKNLEGWWYIRYLGKEGWAP

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

81.6

0.71

0.8

78.3

35.1

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

44.2

-0.3

2.4

68.9

42.4

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021321

24039734 - 24268967

229234

ENSAPLT00000045338

24039734 - 24210668

170935

ENSAPLT00000006940

24040367 - 24102759

62393

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000026005

24040367 - 24210668

170302

ENSAPLT00000023035

24040367 - 24268967

228601

ENSAPLT00000045467

24040367 - 24106423

66057