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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24051855_24063033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24051855 - 24063033

Intron Length:

11179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAATGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTCACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TCTCCCTTCACT

Flanking Amino Acid:

GGIVNRQQSREEKYVTIQPY

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

76.1

27.5

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

68.4

0.41

0.8

62.5

33.2

Minor 5ss

25.9

-2.8

30.8

43.1

Minor BPS

70.7

0.73

1.8

85.35

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021321

24039734 - 24268967

229234

ENSAPLT00000045467

24040367 - 24106423

66057

ENSAPLT00000006940

24040367 - 24102759

62393

ENSAPLT00000045338

24039734 - 24210668

170935

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000023035

24040367 - 24268967

228601