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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24102406_24106281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24102406 - 24106281

Intron Length:

3876

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTTAC

U12 Branch Point Sequence:

GCTGGCTTACGG

Flanking Amino Acid:

KRTRGKSNRRGADASSEPMI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.9

41.2

Major BPS

49.4

-0

1.3

43.1

41.5

Major PPT

79.9

0.67

0.7

72.6

32.1

Minor 5ss

28.4

-2.5

3.8

46.4

Minor BPS

40.3

-0.8

2.3

42.9

48.4

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045467

24040367 - 24106423

66057