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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24125258_24176693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24125258 - 24176693

Intron Length:

51436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

GTCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CAGCTCTAACCA

Flanking Amino Acid:

ARPEDLNPPKEDYGSSKRKS

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

72.3

0.55

73.3

28.9

Major PPT

89.4

0.89

0.7

87.9

29.5

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

43.8

-0.4

1.9

48.83

42.1

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023035

24040367 - 24268967

228601

ENSAPLT00000021321

24039734 - 24268967

229234

ENSAPLT00000045338

24039734 - 24210668

170935

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000026005

24040367 - 24210668

170302