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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24210384_24233742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24210384 - 24233742

Intron Length:

23359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

TTCCCCCTAAAG

Flanking Amino Acid:

RRYSKFFDLQMQLLDKFPIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

86.6

0.82

0.8

80.9

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

53.6

-0

1.9

63.25

43.9

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000023035

24040367 - 24268967

228601

ENSAPLT00000021321

24039734 - 24268967

229234