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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24233824_24268895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24233824 - 24268895

Intron Length:

35072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TTTCCCTGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TTTTCCCTGACC

Flanking Amino Acid:

EKRRNPSKHYVYIINVTWSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

66.6

39.6

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

72.4

0.5

66.6

39.3

Minor 5ss

-2.4

3.1

33.7

Minor BPS

75.5

0.79

1.6

87.16

29.5

Associated Gene:

Gene:

SH3PXD2A

Ensembl Gene ID:

ENSAPLG00000006691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021321

24039734 - 24268967

229234

ENSAPLT00000033859

24003183 - 24268967

265785

ENSAPLT00000023035

24040367 - 24268967

228601