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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24281844_24285538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24281844 - 24285538

Intron Length:

3695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CTTTTTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATT

Flanking Amino Acid:

VVKEDCRKPRHAEKGCHFLH

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

75.3

40.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.5

0.89

0.6

84.3

23.8

Minor 5ss

39.3

-1.2

2.7

48.5

40.3

Minor BPS

71.6

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

STN1

Ensembl Gene ID:

ENSAPLG00000006661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030730

24281686 - 24322501

40816

ENSAPLT00000006921

24281686 - 24308392

26707