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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24285612_24286214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24285612 - 24286214

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CCGTTACCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTCCGTTACCT

Flanking Amino Acid:

KPSSSKDLYHVTDYDKDLLK

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

80.7

33.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

72.4

0.5

0.9

62.5

38.8

Minor 5ss

36.4

-1.5

3.4

53.2

Minor BPS

58.5

0.34

2.3

85.35

Associated Gene:

Gene:

STN1

Ensembl Gene ID:

ENSAPLG00000006661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006921

24281686 - 24308392

26707

ENSAPLT00000030730

24281686 - 24322501

40816