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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24286338_24293305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24286338 - 24293305

Intron Length:

6968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GATTTCTCACCA

Flanking Amino Acid:

GEPLSSRSCQVNSKPDSSSK

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

0.87

0.8

85.6

Major PPT

78.5

0.64

0.8

70.4

35.3

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

52.4

0.07

1.8

65.37

40.8

Associated Gene:

Gene:

STN1

Ensembl Gene ID:

ENSAPLG00000006661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030730

24281686 - 24322501

40816

ENSAPLT00000006921

24281686 - 24308392

26707