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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24294336_24295487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24294336 - 24295487

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTCCGCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GTTTAAAAGACA

Flanking Amino Acid:

QQREIQASCFYKVDDPVCDV

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

76.1

32.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

82.4

0.73

0.8

73.9

36.7

Minor 5ss

35.7

-1.6

3.5

43.6

Minor BPS

41.2

-0.6

2.2

58.76

40.2

Associated Gene:

Gene:

STN1

Ensembl Gene ID:

ENSAPLG00000006661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030730

24281686 - 24322501

40816

ENSAPLT00000006921

24281686 - 24308392

26707