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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24295650_24297297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24295650 - 24297297

Intron Length:

1648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

CCTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

ATTTGCTCACCT

Flanking Amino Acid:

KNPMVSRSLSGSPSTLSSLK

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

88.7

0.87

0.7

83.3

25.2

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

51.5

0.12

2.2

78.58

43.6

Associated Gene:

Gene:

STN1

Ensembl Gene ID:

ENSAPLG00000006661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030730

24281686 - 24322501

40816

ENSAPLT00000006921

24281686 - 24308392

26707