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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24301854_24306216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24301854 - 24306216

Intron Length:

4363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAC

U12 Branch Point Sequence:

TTACACTTAACC

Flanking Amino Acid:

KEMRESKQVPGIFFYNGHPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

68.3

0.45

69.6

32.8

Major PPT

73.1

0.52

65.8

45.3

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

71.5

0.66

1.5

78.46

36.1

Associated Gene:

Gene:

STN1

Ensembl Gene ID:

ENSAPLG00000006661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030730

24281686 - 24322501

40816

ENSAPLT00000006921

24281686 - 24308392

26707