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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2430828_2437260_R

Intron Information:

Intron Rank:

145169

Intron Class:

major

Intron Phase:

Intron Coordinates:

2430828 - 2437260

Intron Length:

6433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCATGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

CCTGTGGGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

78.3

0.64

0.9

72.1

37.6

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

35.7

-1

2.4

50.82

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046950

2430067 - 2437546

7480