Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_24346972_24348132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24346972 - 24348132

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

ACTTAATTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTAACTTAATT

Flanking Amino Acid:

LFTLDGDIKLADFGVSAKNT

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

69.1

0.43

62.9

41.3

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

75.3

0.87

1.4

90.07

33.6

Associated Gene:

Gene:

SLK

Ensembl Gene ID:

ENSAPLG00000006212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045620

24322489 - 24361680

39192

ENSAPLT00000006485

24322489 - 24361680

39192