Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_24349376_24350367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24349376 - 24350367

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGA

5'SS Class:

major

3'SS Sequence:

TTATTTTCACAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTATTTTCACA

Flanking Amino Acid:

ARWSATQLLQHPFVTVTSNK

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.1

40.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

68.7

0.42

1.1

69.6

40.6

Minor 5ss

28.4

-2.5

3.5

38.3

46.7

Minor BPS

60.4

0.32

1.8

75.15

36.6

Associated Gene:

Gene:

SLK

Ensembl Gene ID:

ENSAPLG00000006212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045620

24322489 - 24361680

39192

ENSAPLT00000006485

24322489 - 24361680

39192