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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24372361_24372550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24372361 - 24372550

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TCAGGGCCAACT

Flanking Amino Acid:

KGERGYPGPKGDPGPMGPPG

Intron Amino Acid Position:

1452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

44.2

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

84.1

0.77

0.8

81.3

30.7

Minor 5ss

31.1

-2.2

3.2

39.3

46.1

Minor BPS

34.8

-1

2.5

53.28

47.5

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884

ENSAPLT00000038480

24371956 - 24403839

31884