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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24372614_24373188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24372614 - 24373188

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTCACCTTAATT

Flanking Amino Acid:

VTEDLMDFFRAHGTVQGPPG

Intron Amino Acid Position:

1431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

89.2

0.88

0.6

81.6

30.4

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

73.4

0.81

1.3

80.31

42.1

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884