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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24374636_24374873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24374636 - 24374873

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAAGCAC

5'SS Class:

major

3'SS Sequence:

CCTCTCTCTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TGTCCTCTCACT

Flanking Amino Acid:

SLEDISAYLQNVGYSSISGV

Intron Amino Acid Position:

1193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

60.1

Major BPS

66.8

0.42

1.1

37.7

Major PPT

69.8

0.45

67.4

32.9

Minor 5ss

32.1

-2

3.4

41.5

39.6

Minor BPS

49.7

0.06

2.1

74.99

41.5

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884