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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24377820_24378091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24377820 - 24378091

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGTTA

5'SS Class:

major

3'SS Sequence:

CTCTATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

GTCTCCTTCACT

Flanking Amino Acid:

PGPPGPPGPKGDAGVPGAPG

Intron Amino Acid Position:

957

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

0.9

74.2

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

84.3

0.77

0.8

76.2

37.5

Minor 5ss

34.2

-1.8

3.4

46.2

49.1

Minor BPS

71.8

0.77

1.8

84.57

42.1

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884

ENSAPLT00000038480

24371956 - 24403839

31884