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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24378462_24378980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24378462 - 24378980

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CAAATATTAACG

Flanking Amino Acid:

PGPPGPKGDQGEPGPRGFTG

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.7

0.8

75.3

33.1

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

48.9

-0.2

1.7

51.24

42.5

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884