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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24379041_24379199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24379041 - 24379199

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCC

5'SS Class:

major

3'SS Sequence:

GTTTTAATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

GRPGSSISTSETFLSGPPGP

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

66.7

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.1

0.7

0.9

74.2

39.4

Minor 5ss

43.7

-0.7

3.1

59.5

45.4

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884