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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24379263_24380060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24379263 - 24380060

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAAGC

Flanking Amino Acid:

QGPPGPRGPPGEGLPGPPGP

Intron Amino Acid Position:

874

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

70.5

0.46

0.9

67.1

32.7

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

65.9

0.48

1.7

78.77

36.7

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884