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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24381870_24382723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24381870 - 24382723

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTTTTTTGAAAC

Flanking Amino Acid:

PGPTGPPGVPGPVGPAGLPG

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.8

0.47

1.1

64.6

44.9

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

58.7

0.25

1.5

68.97

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006397

24371956 - 24403839

31884

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884