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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24382805_24383021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24382805 - 24383021

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

GTGTACGTATTT

Flanking Amino Acid:

PGAPGKVISAEGSSTIALPG

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

43.7

-0.7

2.6

56.9

42.5

Minor BPS

44.7

-0.3

2.3

65.35

45.4

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884