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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24384371_24384725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24384371 - 24384725

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

ATATCTTAGAAT

Flanking Amino Acid:

PGPPGYAGEPGLTGPQGPPG

Intron Amino Acid Position:

758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

79.2

0.72

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

51.2

0.12

1.8

70.89

40.1

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884