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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24384771_24385140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24384771 - 24385140

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATATCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GAGTTGTTAATG

Flanking Amino Acid:

AGRDGKPGQKGEPGLPGPPG

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

84.4

0.85

34.5

Major PPT

68.4

0.42

0.9

59.9

41.1

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

48.5

-0.2

2.1

52.45

42.7

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884