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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24385177_24385535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24385177 - 24385535

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGAAT

U12 Branch Point Sequence:

TTTTTTTGGACA

Flanking Amino Acid:

PGEPGAKGPPGQAGRDGKPG

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

49.1

-0

1.5

45.4

Major PPT

80.9

0.7

79.9

37.7

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

66.3

0.51

1.4

78.29

31.6

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884